PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43135.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 386aa MW: 43301.9 Da PI: 4.923

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.1	6.4e-18	12	117	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 + F tde+l L++ ++g++l++ +vi++v+ y++ P++Lp + wy +++++++ +++g W+a+g++ e++s ++ +g + GAY43135.1 12 VDFASTDENLFG-SLERMIRGSPLPC-NVINDVNPYNHMPSNLP------DGVWYLVCSKENTS---------AQHGQWRAKGETCEIFS-NSYIIGWR 92 67999***95.5********.99**********9......45799999987654.........5689*********.999* PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 +tL f++g+ p+ +ktdWvm+e+r+ GAY43135.1 93 TTLEFFEGQVPNERKTDWVMQEFRI 117 *********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MCPPTASTPI DVDFASTDEN LFGSLERMIR GSPLPCNVIN DVNPYNHMPS NLPDGVWYLV 60 CSKENTSAQH GQWRAKGETC EIFSNSYIIG WRTTLEFFEG QVPNERKTDW VMQEFRITQK 120 RLYGDKKEED SSSLCRVFLS GKQSPNHEMQ QKLFSANINN ETHSHSTELS FDKDKDDTRQ 180 VSIIRCEVSN DGESRTSAVM GRPTNHAEDN LPEADNFSED DFLELHDLDQ PLSPSSSSDN 240 SSGMTLSSDE YFDHLALLQE LEPCKNKGVG PENAEYKYSF STSHTPNEVV IFPGSLINVE 300 GSKPETGDIF KTESDSAMVN RPLDSRVLKQ AVQGQKANYR GESPSSNSHG QTSSFNGQIA 360 LQNGEKKAAV GRMKKLKRKY FCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MCPPTASTPI DVDFASTDEN LFGSLERMIR GSPLPCNVIN DVNPYNHMPS NLPDGVWYLV  60
CSKENTSAQH GQWRAKGETC EIFSNSYIIG WRTTLEFFEG QVPNERKTDW VMQEFRITQK  120
RLYGDKKEED SSSLCRVFLS GKQSPNHEMQ QKLFSANINN ETHSHSTELS FDKDKDDTRQ  180
VSIIRCEVSN DGESRTSAVM GRPTNHAEDN LPEADNFSED DFLELHDLDQ PLSPSSSSDN  240
SSGMTLSSDE YFDHLALLQE LEPCKNKGVG PENAEYKYSF STSHTPNEVV IFPGSLINVE  300
GSKPETGDIF KTESDSAMVN RPLDSRVLKQ AVQGQKANYR GESPSSNSHG QTSSFNGQIA  360
LQNGEKKAAV GRMKKLKRKY FCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	2e-16	NAC family protein