PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY42997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27167.4 Da PI: 7.4335 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9e-19 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g GAY42997.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAVAYDAAARKLYG 89 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MSKALMGGIG EKKQLKKPAQ ASSRKGCMRG KGGPENALCT YKGVRQRTWG KWVAEIREPN 60 RGARLWLGTF DTSHEAAVAY DAAARKLYGP DAKLNLPELP SAQSHHLPAS SVNCTQHVAQ 120 RRNQPQMIHN SGITCSSNSP LPRSSNNDAT QVYNFNYNNS AMSFPDNGSV GSHGKLAENE 180 VKFSLNEQET DGFWENLNVN SPVFDESIWA EAAMSVDYPV MGEQGLLNAN FVDASCCGWD 240 MLPTPWCV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-50 | ERF family protein |