PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42963.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BBR-BPC
Protein Properties Length: 418aa    MW: 47213.6 Da    PI: 9.8748
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind381.21.6e-11611441819301
   GAGA_bind  19 slkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla...salpvgvqvlsgtksidslqql 114
                 s+k     q+m+++aerda+++ernla+sekkaa+aerdmaflqrd+a+aern+a++erdn++++l+++ensl    s++p+g+q+++g+k++++ qq+
  GAY42963.1 114 SMK-----QIMTIMAERDAALQERNLAISEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLGgnmSSCPPGCQISRGVKHMHHPQQH 207
                 444.....***************************************************************9878889********************5 PP

   GAGA_bind 115 se..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader......................... 186
                  +  +++++ a+  re+++ +alp++  a+ea + ++ k   r   +ke+k  +++kk++ks +kvk+e++d +                         
  GAY42963.1 208 VHqlHHVSEAAYS-REMHTGDALPVSPGASEAAKPRRYK---R---AKEPKVLSPNKKTAKSPRKVKRENEDLNkvvfgkpsewksvqdldggdddvnk 299
                 5545555565555.**********988666665555554...4...444444455555556667777777664447788889999************** PP

   GAGA_bind 187 ....skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                     sk+++k + l+ln+v++Dest+P+P+CsCtG+lrqCYkWGnGGWqSaCCtt++S+yPLP+++++r+aR++grKmS++af+klL +LaaeG+dls+
  GAY42963.1 300 qstaSKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLTRLAAEGHDLSH 398
                 *************************************************************************************************** PP

   GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                 pvDLkdhWAkHGtn+++ti+
  GAY42963.1 399 PVDLKDHWAKHGTNRYITIK 418
                 *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MKFLSCSYLQ LLGFVVLIHL PWKGLAGFVW ASDVNFFLLF VHHKWMTVGI VKMEDTKQIS  60
IKQLRDRYVE EILHKQCGLT YHILKCKRFA YEILCLLTIL SLMLPQWLMH HQPSMKQIMT  120
IMAERDAALQ ERNLAISEKK AAIAERDMAF LQRDTAIAER NNAILERDNA IASLQYRENS  180
LGGNMSSCPP GCQISRGVKH MHHPQQHVHQ LHHVSEAAYS REMHTGDALP VSPGASEAAK  240
PRRYKRAKEP KVLSPNKKTA KSPRKVKREN EDLNKVVFGK PSEWKSVQDL DGGDDDVNKQ  300
STASKSDWKG QVLGLNQVTF DESTMPPPAC SCTGVLRQCY KWGNGGWQSA CCTTSLSMYP  360
LPAVPNKRHA RVGGRKMSGS AFNKLLTRLA AEGHDLSHPV DLKDHWAKHG TNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-147BBR-BPC family protein