PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42962.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BBR-BPC
Protein Properties Length: 390aa    MW: 43564.7 Da    PI: 10.0767
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind388.69.6e-119563901301
   GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla 92 
                 mdd g+re  r+k+ +y+ a  + l +++   +q+m+++aerda+++ernla+sekkaa+aerdmaflqrd+a+aern+a++erdn++++l+++ensl 
  GAY42962.1  56 MDDGGHREngRHKAdQYKAAqgQWLMHHQpsMKQIMTIMAERDAALQERNLAISEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG 154
                 9*****999*****99*9544433433331145***************************************************************987 PP

   GAGA_bind  93 ...salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186
                    s++p+g+q+++g+k++++ qq+ +  +++++ a+  re+++ +alp++  a+ea + ++ k   r   +ke+k  +++kk++ks +kvk+e++d +
  GAY42962.1 155 gnmSSCPPGCQISRGVKHMHHPQQHVHqlHHVSEAAYS-REMHTGDALPVSPGASEAAKPRRYK---R---AKEPKVLSPNKKTAKSPRKVKRENEDLN 246
                 8889********************55545555565555.**********988666665555554...4...4444444555555566677777776644 PP

   GAGA_bind 187 .............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRia 256
                                              sk+++k + l+ln+v++Dest+P+P+CsCtG+lrqCYkWGnGGWqSaCCtt++S+yPLP+++++r+aR++
  GAY42962.1 247 kvvfgkpsewksvqdldggdddvnkqstaSKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVG 345
                 47788889999**************************************************************************************** PP

   GAGA_bind 257 grKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 grKmS++af+klL +LaaeG+dls+pvDLkdhWAkHGtn+++ti+
  GAY42962.1 346 GRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 390
                 ********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MKRYRIVSRL LGFVVLIHLP WKGLAGFVWA SDVNFFLVIW VAYLLLANSA FCASQMDDGG  60
HRENGRHKAD QYKAAQGQWL MHHQPSMKQI MTIMAERDAA LQERNLAISE KKAAIAERDM  120
AFLQRDTAIA ERNNAILERD NAIASLQYRE NSLGGNMSSC PPGCQISRGV KHMHHPQQHV  180
HQLHHVSEAA YSREMHTGDA LPVSPGASEA AKPRRYKRAK EPKVLSPNKK TAKSPRKVKR  240
ENEDLNKVVF GKPSEWKSVQ DLDGGDDDVN KQSTASKSDW KGQVLGLNQV TFDESTMPPP  300
ACSCTGVLRQ CYKWGNGGWQ SACCTTSLSM YPLPAVPNKR HARVGGRKMS GSAFNKLLTR  360
LAAEGHDLSH PVDLKDHWAK HGTNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-160BBR-BPC family protein