PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY42932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 381aa MW: 42831.4 Da PI: 5.5201 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85.1 | 5.4e-27 | 137 | 202 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++g+++ln a+ L +v ++RRiYDi+NVLe+++liek++kn+irwkg GAY42932.1 137 RYDSSLGLLTRKFINLIQEAKDGTLDLNRTAEVL---EV--QKRRIYDITNVLEGIRLIEKTSKNHIRWKG 202 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MQEKNRDNKT SKEKVTTSLG ANRNYHSLLG KIPLSSNQNN TLNVNSNSTD IDICNKIEDT 60 HSAFSRLELK QTNELANHAA QNIARRDKVV NAPSLEPESC ASGKSNRKLK GLKSTKSGTQ 120 GSNADAPNGL NLSNGCRYDS SLGLLTRKFI NLIQEAKDGT LDLNRTAEVL EVQKRRIYDI 180 TNVLEGIRLI EKTSKNHIRW KGSDSLGTSK LDDQVARLKA EIESLHAEEC RIDDSIREKQ 240 ELIRTLEENE NHQKYALFSR MNQTLIAIKA PQASYIEVPD PDEVYENDVH SKYQSEGKDI 300 TLQQANSANP STWNYEPCGV PNFRLSLEHE DNQKRSSDTF SLMSSEAASG IQKIVPSDCD 360 IDDDYWFRSD PEVSITDLWN N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G47870.1 | 4e-82 | E2F/DP family protein |