PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42928.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 257aa    MW: 28466.8 Da    PI: 10.588
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00018224246223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  C+ Cg++F+  ++L+ H+ + H
  GAY42928.1 224 ACSQCGEVFPKIESLELHQAVrH 246
                 6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
LILYPPPLQK RNAKLSLKFQ KHLSLSLSHM KERAGYVTVL LNLLAFLFMA LVTFLPEPTE  60
SKKQPAAPPP PSKRNRKQQK VQKQKEKQPS SWDQIKNLLT CKQIEGSKVH DPAAKNVNGY  120
SRLGSSCSSI CSFKDVVHGN TKVVHRADNS PESSTLGQET GLLSRKAVNG SSTRSASVSA  180
RSNGCRTYSS SSRGMQFRKL SGCYECHTII DPSRFPSPRT TICACSQCGE VFPKIESLEL  240
HQAVRHAGHF FSLNKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.12e-54C2H2 family protein