PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42749.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 377aa MW: 39968.8 Da PI: 5.2996

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	75.6	6.5e-24	281	343	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN+ L++el++l++e++kl+se+ GAY42749.1 281 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSEN 343 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGTGEENTSA KTAKTASSTQ EIPTTPSYAD WSSSMQAFYG AGATPPPFFA STVASPTPHP 60 YLWGSQHPLM PPYGTPVPYQ AIYPPGGVYA HPSMATTPTA APTNTEPEGK GPEAKDRASA 120 KKSKGTPGGK AGEIVKATSG SGNDGVSQSS AESGSDGSSD ASDENGNQQE FAGGKKGSFD 180 KMLADGIYHF HFAVNYSQLL LSNHKSFSTA NTENNTAEAV PGSVPGKPVV SMPATNLNIG 240 MDLWNTSPAA AGAAKMRTNP SGASPAVAPA GIMPDQWIQD ERELKRQKRK QSNRESARRS 300 RLRKQAECEE LQARVETLSN ENRNLRDELQ RLSEECEKLT SENNSIKEDL SRLCGPEAVA 360 NLEQSNPTQS SGEEENS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGTGEENTSA KTAKTASSTQ EIPTTPSYAD WSSSMQAFYG AGATPPPFFA STVASPTPHP  60
YLWGSQHPLM PPYGTPVPYQ AIYPPGGVYA HPSMATTPTA APTNTEPEGK GPEAKDRASA  120
KKSKGTPGGK AGEIVKATSG SGNDGVSQSS AESGSDGSSD ASDENGNQQE FAGGKKGSFD  180
KMLADGIYHF HFAVNYSQLL LSNHKSFSTA NTENNTAEAV PGSVPGKPVV SMPATNLNIG  240
MDLWNTSPAA AGAAKMRTNP SGASPAVAPA GIMPDQWIQD ERELKRQKRK QSNRESARRS  300
RLRKQAECEE LQARVETLSN ENRNLRDELQ RLSEECEKLT SENNSIKEDL SRLCGPEAVA  360
NLEQSNPTQS SGEEENS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	304	RRSRLRK
2	298	305	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	2e-94	bZIP family protein