PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42528.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 372aa MW: 42440.3 Da PI: 7.4963

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.1	3e-52	10	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ + GAY42528.1 10 VPPGFRFHPTDEELLYYYLRKKVSFEAIDL-DVIREVDLNKLEPWDLKdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHITm 107 69**************************.9***********943444443456********************************9988 PP NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g++ktLvfy+grap+g+ktdW+mheyrl GAY42528.1 108 anvnSSRRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 144 77777777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MMAGNGELSV PPGFRFHPTD EELLYYYLRK KVSFEAIDLD VIREVDLNKL EPWDLKDKCR 60 IGSGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIHITMANV NSSRRIGMRK 120 TLVFYTGRAP HGQKTDWIMH EYRLDDDEYS SSSSEVVQQE DGWVVCRVFK KKNHINRSYF 180 QSEVAHEYNQ EEHIISNNNN NYIMKTSATA SSAAPEPKQS RRRHLQALYH ECNSSFDGSM 240 HLPQLFSSES AVITPSFISP MISLNNMDIE CSQNLLRLTT SASGSGSGLM QQAAHDQRFN 300 GDWSFLDKLL TSHVHHSAQQ QPDQINSHSK CNPSSSSTVV DHVQVASSST HYQKFPLYYL 360 GCDAEDIMKF SK

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MMAGNGELSV PPGFRFHPTD EELLYYYLRK KVSFEAIDLD VIREVDLNKL EPWDLKDKCR  60
IGSGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIHITMANV NSSRRIGMRK  120
TLVFYTGRAP HGQKTDWIMH EYRLDDDEYS SSSSEVVQQE DGWVVCRVFK KKNHINRSYF  180
QSEVAHEYNQ EEHIISNNNN NYIMKTSATA SSAAPEPKQS RRRHLQALYH ECNSSFDGSM  240
HLPQLFSSES AVITPSFISP MISLNNMDIE CSQNLLRLTT SASGSGSGLM QQAAHDQRFN  300
GDWSFLDKLL TSHVHHSAQQ QPDQINSHSK CNPSSSSTVV DHVQVASSST HYQKFPLYYL  360
GCDAEDIMKF SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-105	NAC family protein