PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42498.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 344aa MW: 39084.5 Da PI: 4.5753

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.1	1.4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yL +k++g+++el e+i+e+d+yk+ePwdLp k + +++ ewyfFs+rdkky++g+r+nrat++gyWkatgkd++v+s ++ GAY42498.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEIDLYKHEPWDLPdKsYLPGKDMEWYFFSPRDKKYPNGSRTNRATRAGYWKATGKDRTVHS-HK 102 79**************************.99**********95335556888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kktLv+y+grap+g +t+Wvmheyrl GAY42498.1 103 QSVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE IDLYKHEPWD LPDKSYLPGK 60 DMEWYFFSPR DKKYPNGSRT NRATRAGYWK ATGKDRTVHS HKQSVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLLDPLSGA ASSSLKDSYA LCRVFKKTIQ IPKAKESLQE AMGNNNNDAE 180 NQTETVGFSS DEQMLGDDTS GREAEENDYS KFPSDTSSSD FTQATPTEAG NVNADEFQAP 240 FISDEANSAV NMYSLGVDFT TNLIQDIQMP SYANLQYQCP FPPLELEDFP QINIAETKPS 300 KPEIFDGCLM YDKCRDYMNG ALEEIYYLCS AQDTNNSVAL SMQD

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE IDLYKHEPWD LPDKSYLPGK  60
DMEWYFFSPR DKKYPNGSRT NRATRAGYWK ATGKDRTVHS HKQSVGMKKT LVYYRGRAPH  120
GIRTNWVMHE YRLLDPLSGA ASSSLKDSYA LCRVFKKTIQ IPKAKESLQE AMGNNNNDAE  180
NQTETVGFSS DEQMLGDDTS GREAEENDYS KFPSDTSSSD FTQATPTEAG NVNADEFQAP  240
FISDEANSAV NMYSLGVDFT TNLIQDIQMP SYANLQYQCP FPPLELEDFP QINIAETKPS  300
KPEIFDGCLM YDKCRDYMNG ALEEIYYLCS AQDTNNSVAL SMQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-110	NAC family protein