PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42497.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 353aa MW: 39974.1 Da PI: 7.0961

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl GAY42497.1 22 KGLWSPEEDEKLLKHITAHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 69 678*******************************************97 PP
2	Myb_DNA-binding	58.3	1.7e-18	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+++++d+++ lG++ W+ Ia++++ gRt++++k++w++ GAY42497.1 75 RGSFTEEEEQIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNYWNS 118 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
YRETNQREKM GHRCCSKQKV KKGLWSPEED EKLLKHITAH GHGSWSSVPK LAGLQRCGKS 60 CRLRWINYLR PDLRRGSFTE EEEQIIIDVH RILGNRWAQI AKHLPGRTDN EVKNYWNSCI 120 KKKLMSKGLD PKTHILMPSH QRAAASSKIA CNIQLPISSP AFTVSSSQIM SNIVSMEIIR 180 PPVLTLPAPT DQFSLLQPTA IPMPPASEYQ NPNFVWNAGD QNSQDYSTNF PNYVSSSVDH 240 LRNGPMSSPS CSSLMNPPGF GLTDENYCMW GTNTNIEVLS LEAKLQQQRE KEKNICDHQA 300 PQMEKIDDEA NMDCSFDSSS FDHHLDFVDS TLMAGAMCRD FSSFSTDDFA WNF

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

YRETNQREKM GHRCCSKQKV KKGLWSPEED EKLLKHITAH GHGSWSSVPK LAGLQRCGKS  60
CRLRWINYLR PDLRRGSFTE EEEQIIIDVH RILGNRWAQI AKHLPGRTDN EVKNYWNSCI  120
KKKLMSKGLD PKTHILMPSH QRAAASSKIA CNIQLPISSP AFTVSSSQIM SNIVSMEIIR  180
PPVLTLPAPT DQFSLLQPTA IPMPPASEYQ NPNFVWNAGD QNSQDYSTNF PNYVSSSVDH  240
LRNGPMSSPS CSSLMNPPGF GLTDENYCMW GTNTNIEVLS LEAKLQQQRE KEKNICDHQA  300
PQMEKIDDEA NMDCSFDSSS FDHHLDFVDS TLMAGAMCRD FSSFSTDDFA WNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	1e-89	MYB family protein