PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42493.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 371aa MW: 41301.7 Da PI: 8.2472

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl GAY42493.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.6e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ GAY42493.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MFQHHKKPSS MNSHHDRPLC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDGLDLQRN TASSSGVIGR 120 SMNDNSHMVD AIRMQMEVQR RLHEQLEVQR HLQLRIEAQG KYMQSILEKA CQTLASGETV 180 TPASFKGTIG NQAVPDVGTM KDFCPPLNFS QFQDLNLYGG DQIDHLQQNM DRQSSLDHGF 240 MQSNDNICLG KKRPSPYNGG SGTGKSPLMW SDDLRLQDLA TAPCIGPQDD PFKGDQIQIA 300 PPSNDLDSIS DIYETKPVLS GDAVSSEKKF EASSAKLERP SPRRTPISTE RMNPAMMNTG 360 GMQQGRNSPY G

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MFQHHKKPSS MNSHHDRPLC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDGLDLQRN TASSSGVIGR  120
SMNDNSHMVD AIRMQMEVQR RLHEQLEVQR HLQLRIEAQG KYMQSILEKA CQTLASGETV  180
TPASFKGTIG NQAVPDVGTM KDFCPPLNFS QFQDLNLYGG DQIDHLQQNM DRQSSLDHGF  240
MQSNDNICLG KKRPSPYNGG SGTGKSPLMW SDDLRLQDLA TAPCIGPQDD PFKGDQIQIA  300
PPSNDLDSIS DIYETKPVLS GDAVSSEKKF EASSAKLERP SPRRTPISTE RMNPAMMNTG  360
GMQQGRNSPY G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-127	G2-like family protein