PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY42431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 28130.6 Da PI: 8.2008 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.7 | 1.2e-28 | 9 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppG+rF Ptdee+v +yL +kv+g++++++ vi+++d+y+ e ++ +++e+ +yfF++ +kk+++g + +r t+ g+W+++ +++ ++ GAY42431.1 9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRynkt 107 79****************************999***********99985445688899**************************998877666668888 PP NAM 96 .....kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k++++g ++ +++ +g++ k +Wvmheyrl GAY42431.1 108 gdkiiKKQHIGSRRNFTYVpkEGSRGGVIKGTWVMHEYRL 147 888887788**********5445555556*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MERHQLPALP PGYRFAPTDE EIVAHYLYNK VHGRPVSTSA VIDNIDVYRD ENVWIRIFER 60 TGENALYFFT TLKKKTENGV QVERETNCGT WRSQKNTRIY RHRYNKTGDK IIKKQHIGSR 120 RNFTYVPKEG SRGGVIKGTW VMHEYRLDGI SISNARINNI GDYVICRIKK KQPKREELMS 180 GDNDGPVRNS MSGLVQPPPS NNTSEWFNVQ DLEKILFDSS TANDEGVDLE DFSLGISLED 240 LDNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 6e-25 | NAC family protein |