PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42291.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 328aa    MW: 35985.6 Da    PI: 10.1824
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20167216255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  GAY42291.1 167 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 216
                 59*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSVSSSLLNN NMQKSTFHTT TVPFFSMPDT FQTPETFRFF TETQSLCGPI FNSNLSFPSL  60
PALNYLNPPH YFPYLTDVSV DSSLFDSETK TESPVFLSEN KKKAVTETET DAATPPVLDG  120
IAAVVGLNVL FGTKTNPTKK TETPDAVEEN IGSPRKNDNN TIPVQKNYRG VRKRPWGRWS  180
AEIRDRIGRC RHWLGTFDTA EEAARAYDAA ARRLRGSKAR TNFEIPSVLP LIATPCLSPS  240
SSGEVKKAKG KVINSNSSGR RNKCSVVTSM AHLFSNNAIS FNNNGFDHRQ AKRNAKAKDT  300
NTLELDLKLG VGLAAKRNTA ASAPSMAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.14e-30ERF family protein