PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY42100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 871aa MW: 95217.3 Da PI: 6.3856 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.5 | 7.3e-21 | 134 | 189 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k GAY42100.1 134 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 189 688999***********************************************999 PP | |||||||
2 | START | 48.1 | 3.2e-16 | 341 | 452 | 1 | 93 |
HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 ela++a++elvk+a+ +ep+W +s + +n +e+l++f++ + + +ea+r++g+v+ ++ lve+l+d + +W e+++ + +t++vi GAY42100.1 341 ELALAAMDELVKMAQTDEPLWIRSFegsgrQVLNHEEYLRTFTPCIGlkpngFVTEASRETGMVIINSLALVETLMDPN-RWAEMFPcmiaRTATTDVI 438 5899********************99*99999***********99989*9*9***************************.******************* PP CTT......EEEEE CS START 86 ssg......galql 93 ssg galql GAY42100.1 439 SSGmggtrnGALQL 452 ***98888877775 PP | |||||||
3 | START | 133.8 | 1.9e-42 | 489 | 602 | 94 | 206 |
EEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHH CS START 94 mvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglae 191 m aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d ++ + + +v +++lpSg+++++++ng+skvtwveh++++++++h+l+++l+ sg+ + GAY42100.1 489 MHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 587 889****************************************999***************************************************** PP HHHHHHHHTXXXXXX CS START 192 gaktwvatlqrqcek 206 ga++wvatlqrqce+ GAY42100.1 588 GAQRWVATLQRQCEC 602 *************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 871 aa Download sequence |
MSFGGFLENN ISTSSGGGGA RIVADISYTN NDNNNNNMPT TTTLAHPRLL SSTPQPLSKS 60 MFNSPGLSLA LQQPNIDNQG GGDLQLQRMG ESFEGIIGRR SREDLLEHES RSGSDNMDGA 120 SGDDLDAADN PPRKKRYHRH TPQQIQELES LFKECPHPDE KQRLELSKRL CLETRQVKFW 180 FQNRRTQMKT QLERHENSLL RQENDKLRAE NMSIRDAMRN PICTNCGGPA IIGDISLEEQ 240 HLRIENARLK DELDRVCALA GKFLGRPVSS MGPPPMPNSS LELGVGTING FGGLSSTVTT 300 TLPADFGTGI SNALPVVMPP NRSGPGVTGL DRSIERSMFL ELALAAMDEL VKMAQTDEPL 360 WIRSFEGSGR QVLNHEEYLR TFTPCIGLKP NGFVTEASRE TGMVIINSLA LVETLMDPNR 420 WAEMFPCMIA RTATTDVISS GMGGTRNGAL QLVEFYNSII NEHLINYFLL IILVHKKNKN 480 KTFFSFLEMH AELQVLSPLV PVREVNFLRF CKQHAEGVWA VVDVSIDTIR ETSGAPAFVN 540 CRRLPSGCVV QDMPNGYSKV TWVEHAEYDE SQVHQLYKPL IISGMGFGAQ RWVATLQRQC 600 ECLAILMSTS VSARDHTAIT AGGRRSMLKL AQRMTDNFCA GVCASTVHKW NKLNAGNVDE 660 DVRVMTRKSV DDPGEPPGIV LSAATSVWLP VSPQRLFNFL RDERLRSEWD ILSNGGPMQE 720 MAHIAKGQDH GNCVSLLRAS AINANQSSML ILQETCTDAA GSLVVYAPVD IPAMHVVMNG 780 GDSAYVALLP SGFAIVPDGP DSRGPLANGP TSGNGSNGGS QRVGGSLLTV AFQILVNSLP 840 TAKLTVESVE TVNNLISCTV QKIKAALQCE S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |