PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42083.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 334aa    MW: 36445.3 Da    PI: 10.0099
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-2064114256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  GAY42083.1  64 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 114
                 589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGNLVSKVAS SEQNKLKDKI RVYGAHQSFH QQVLNSNAGS ETSKNPTTTN SKGGQATTKP  60
AARRFVGVRQ RPSGRWVAEI KDSSQRVRLW LGTYDTPEEA ARAYDEAARA LRGENARTNF  120
ASSAVNNNNN PLNHSDSGNS SPCVNGRFVA QSDGRNGLSF SSLKAKLSKN LQSIMARTSE  180
NNKKSTKSRV SDHFTFASIF HFRSYQYQTP VDLKNIEKVV QPSIIVPQAA DHMHDPSSWE  240
SSSTVSDGSS TEWGGFRQHG LDSDGLDSDI GEVVVDPTMG WIDSPENIGA CTSEIEASRS  300
RSKRFKVSSS VVVPPTFSGS PQLMMTIDKL VISK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1299304RSRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-14ERF family protein