PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42076.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 495aa MW: 55586.8 Da PI: 6.8845

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.1	2e-23	215	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++l Wt+eLH++F++av+ L G++ A Pk+il++m+v+gL e++ SHLQkYRl GAY42076.1 215 KQKLTWTSELHNKFLQAVRVL-GIDGAHPKKILQHMNVPGLKKENISSHLQKYRL 268 79*****************.******************************8 PP
2	Myb_DNA-binding	38.7	2.3e-12	217	267	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT e++ ++++av+ lG + ++k+I ++m+ g+ +++ s++qky+ GAY42076.1 217 KLTWTSELHNKFLQAVRVLGIDgaHPKKILQHMNvPGLKKENISSHLQKYR 267 689***********************************************7 PP
3	Response_reg	49.7	2e-17	40	148	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vli+d + + + +l ++l+ gy ev +a+ + +a + ++ + D+il +p+md +ell++ re + klp+i+++a ++e+d+l al Ga+ GAY42076.1 40 VLIMDGDSTCLVILSKMLRWFGY-EVLTAKRAADAFYVVrgCADELDIILAETHLPDMDKYELLETVREMS-KLPVIFMSADDNENDMLGALFKGAD 134 89*******************.***********666677********************99.********************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l+Kp++++++ + GAY42076.1 135 FYLVKPISMSDIKN 148 ******999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
EYKRFCLYSC LRLSALMNGE KAISVESGRS AMLPPRGISV LIMDGDSTCL VILSKMLRWF 60 GYEVLTAKRA ADAFYVVRGC ADELDIILAE THLPDMDKYE LLETVREMSK LPVIFMSADD 120 NENDMLGALF KGADFYLVKP ISMSDIKNLW QFAFTKKTDK MVATEGVSSI SSDDTDNHIL 180 PNKWKKSHQD PKRKEATEVD KNVGGVNDDA SVLKKQKLTW TSELHNKFLQ AVRVLGIDGA 240 HPKKILQHMN VPGLKKENIS SHLQKYRLSL KREQDAIGKT VNRDYSESQV ALCNLSSTSN 300 IQGGLFQFPE MQTMTACHQP EVGIQEQKND VNCCILVPSA SSIHFLNNGG WSCNDTSDCK 360 YEQLAPAINQ LDFSYPCSRH ARIGITSNDK LAGFHQMVKS NGEELLIGKM ASSINVDSRL 420 DIGMQVPSSL NQQEEKDQRW QKNFPPGPAP LYPEEYDVYG AGKVELDMKK VSTQLFLVRI 480 LMISGRFYVI LLPVY

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

EYKRFCLYSC LRLSALMNGE KAISVESGRS AMLPPRGISV LIMDGDSTCL VILSKMLRWF  60
GYEVLTAKRA ADAFYVVRGC ADELDIILAE THLPDMDKYE LLETVREMSK LPVIFMSADD  120
NENDMLGALF KGADFYLVKP ISMSDIKNLW QFAFTKKTDK MVATEGVSSI SSDDTDNHIL  180
PNKWKKSHQD PKRKEATEVD KNVGGVNDDA SVLKKQKLTW TSELHNKFLQ AVRVLGIDGA  240
HPKKILQHMN VPGLKKENIS SHLQKYRLSL KREQDAIGKT VNRDYSESQV ALCNLSSTSN  300
IQGGLFQFPE MQTMTACHQP EVGIQEQKND VNCCILVPSA SSIHFLNNGG WSCNDTSDCK  360
YEQLAPAINQ LDFSYPCSRH ARIGITSNDK LAGFHQMVKS NGEELLIGKM ASSINVDSRL  420
DIGMQVPSSL NQQEEKDQRW QKNFPPGPAP LYPEEYDVYG AGKVELDMKK VSTQLFLVRI  480
LMISGRFYVI LLPVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	5e-52	ARR-B family protein