PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41867.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 262aa    MW: 28442.6 Da    PI: 8.1471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-1873123155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr ++ +g+Wv+eIr+p++   + r++lg++  +e+Aa+a++ a+++++g
  GAY41867.1  73 CCYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPIPEMAARAHDVAALAIKG 123
                 78*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAKNINNINE NASLDILRSS SNSAAGGAAS SSSSSSCSES PTKKPSNNIN INCRREKKKA  60
QNGKHRTCSS TGCCYRGVRM RSWGKWVSEI REPRKKSRIW LGTYPIPEMA ARAHDVAALA  120
IKGRSAFLNF PLLAHQLPSP LSKSPKDIQA AAAEAAAAFQ AEPDPLQLPH VRVLSSSSNS  180
NTTTGTTSLL SSDSTNVNTQ ELTSSPNDSL HLHHRDDDDA FFDLPDLFIN GSDHLGGGFC  240
SYLSTSVDTG FRLEEPFLWE YQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-40ERF family protein