PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41639.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 369aa    MW: 40425.3 Da    PI: 7.8485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20178227255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  GAY41639.1 178 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 227
                 59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MAATMDFYSS RPVESSCDPF GGELMEALEP FMKSASASTS PTASPPSYSS SSSTLPPSTS  60
YNYPSYPPPF PTIASQSNLL YPDACSTSST HLFANGLSMN DLGLQQQQQH YQQGTVGLNN  120
LNLFQIQQIQ AQIQLQNPNF WPQQQQKSHL YPQGLNFLSP KPVPMKTVGC PPPKPAKLYR  180
GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT AEEAALAYDK AAYKLRGDFA RLNFPNLRHN  240
GSHIGGEFGE YKPLHSSVDA KLAAICENLA ETQKLGTSKK EKQSNSAQKK RHRSGNKKVD  300
VVEGAGGPGV GVKSECSLSD GSAGSSPVSD LTCQDLTEPP SELELDAASE NFMLQKYPSY  360
EIDWASILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-70ERF family protein