PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41240.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 214aa    MW: 23953.8 Da    PI: 4.9271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-194595155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  GAY41240.1 45 PVYRGVRRRD-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 95
                68*****999.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDSLSSWSSP ESRVGNFSDE DVVLLASSNP KKRAGRKKFR ETRHPVYRGV RRRDSGKWVC  60
EVREPNKKSR IWLGTFPTAE MAARAHDVAA IALRGRLACL NFADSSWRLP LPASTDPKDI  120
QKAAAEAAEA FRPEKDLRRG DDKMDEEEAA ERTTMSDDVF FMDEEAVFGM PRLLTNMAEG  180
MLLPPPPPPQ SNCGGYEEDD VESNADVSLW SYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-74ERF family protein