PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41236.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 624aa MW: 68326 Da PI: 6.6089 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.3 | 8.4e-24 | 199 | 252 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH+rF++a++++ ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ GAY41236.1 199 KAKVVWTNSLHNRFLQAIRHI-TLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 252 6799*****************.9*******************************6 PP | |||||||
2 | Myb_DNA-binding | 28.2 | 4.5e-09 | 202 | 251 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ + +k+I + m+ g+t++++ s++qky+ GAY41236.1 202 VVWTNSLHNRFLQAIRHITLEkaVPKKILEFMNvPGLTRENVASHLQKYR 251 68**************9999999**************************7 PP | |||||||
3 | Response_reg | 78.7 | 2e-26 | 16 | 124 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakd 96 vl+vdD+ + + ++ +l++ +y +v +++ + +al++++ ++ +Dl+++D+ mp+m+Glel kei+ee +lp++v+++ + e+ + + l Ga GAY41236.1 16 VLVVDDDSTSLAIVSAVLKHWDY-DVVTVKRPVDALAMIRIHQdIDLVITDLHMPEMNGLELQKEINEEFIHLPVMVMSSDDRESVIMKSLASGAVF 111 89*********************.***************87777***************************************************** PP EEESS--HHHHHH CS Response_reg 97 flsKpfdpeelvk 109 + +Kp++p++l++ GAY41236.1 112 YMVKPVNPDALRN 124 **********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 624 aa Download sequence |
MSETFMAKPS FLRFNVLVVD DDSTSLAIVS AVLKHWDYDV VTVKRPVDAL AMIRIHQDID 60 LVITDLHMPE MNGLELQKEI NEEFIHLPVM VMSSDDRESV IMKSLASGAV FYMVKPVNPD 120 ALRNVWQYAV TSKKGKSIFI EEKSSLAYGS SADKISFHHD IVPVSSMIEE KESKTNSKRK 180 ASKRRKDELE GENAAAPKKA KVVWTNSLHN RFLQAIRHIT LEKAVPKKIL EFMNVPGLTR 240 ENVASHLQKY RIFLKRVAEN GINAALKNFN HRSSLASGRT SMMLQEVQDY AQAIEKQLQM 300 RTSPFIPRYG RGISELNGNT SFGSIGLQSH NSLSHMGLLG VQDNFHQPFF GNTTYPLYQA 360 NPGTTFGTGL IDMGTNSFSC GGLSGGLMNG TNSNQIFHQK SKLRPDPYDN NTGASSLKGF 420 GASGLEKMWT INNNPYLNYA GIRLKNDGDQ LVGAGEVGLN VKGDAGAGNE GPTFHHLPLG 480 YSSSPAGFAV GNEQEHTSVL PPLSLSQQQY GLGKKVENDF TFGLMNTVNA SVNDDTAQPG 540 RLGEGADFGD LLFDLSDFQF LFQQQGDGEG ALNPNIGSGS GSHQPELNRP INQSQNPVLP 600 SAFADNASGP WNEPTLEQAC PILN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 4e-63 | ARR-B family protein |