PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41236.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ARR-B
Protein Properties Length: 624aa    MW: 68326 Da    PI: 6.6089
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.38.4e-24199252155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k++++Wt+ LH+rF++a++++   ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  GAY41236.1 199 KAKVVWTNSLHNRFLQAIRHI-TLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 252
                 6799*****************.9*******************************6 PP

2Myb_DNA-binding28.24.5e-09202251248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT  ++ ++++a++    +   +k+I + m+  g+t++++ s++qky+
       GAY41236.1 202 VVWTNSLHNRFLQAIRHITLEkaVPKKILEFMNvPGLTRENVASHLQKYR 251
                      68**************9999999**************************7 PP

3Response_reg78.72e-26161241109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakd 96 
                   vl+vdD+ + + ++  +l++ +y +v +++ + +al++++ ++ +Dl+++D+ mp+m+Glel kei+ee  +lp++v+++ + e+ + + l  Ga  
    GAY41236.1  16 VLVVDDDSTSLAIVSAVLKHWDY-DVVTVKRPVDALAMIRIHQdIDLVITDLHMPEMNGLELQKEINEEFIHLPVMVMSSDDRESVIMKSLASGAVF 111
                   89*********************.***************87777***************************************************** PP

                   EEESS--HHHHHH CS
  Response_reg  97 flsKpfdpeelvk 109
                   + +Kp++p++l++
    GAY41236.1 112 YMVKPVNPDALRN 124
                   **********987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MSETFMAKPS FLRFNVLVVD DDSTSLAIVS AVLKHWDYDV VTVKRPVDAL AMIRIHQDID  60
LVITDLHMPE MNGLELQKEI NEEFIHLPVM VMSSDDRESV IMKSLASGAV FYMVKPVNPD  120
ALRNVWQYAV TSKKGKSIFI EEKSSLAYGS SADKISFHHD IVPVSSMIEE KESKTNSKRK  180
ASKRRKDELE GENAAAPKKA KVVWTNSLHN RFLQAIRHIT LEKAVPKKIL EFMNVPGLTR  240
ENVASHLQKY RIFLKRVAEN GINAALKNFN HRSSLASGRT SMMLQEVQDY AQAIEKQLQM  300
RTSPFIPRYG RGISELNGNT SFGSIGLQSH NSLSHMGLLG VQDNFHQPFF GNTTYPLYQA  360
NPGTTFGTGL IDMGTNSFSC GGLSGGLMNG TNSNQIFHQK SKLRPDPYDN NTGASSLKGF  420
GASGLEKMWT INNNPYLNYA GIRLKNDGDQ LVGAGEVGLN VKGDAGAGNE GPTFHHLPLG  480
YSSSPAGFAV GNEQEHTSVL PPLSLSQQQY GLGKKVENDF TFGLMNTVNA SVNDDTAQPG  540
RLGEGADFGD LLFDLSDFQF LFQQQGDGEG ALNPNIGSGS GSHQPELNRP INQSQNPVLP  600
SAFADNASGP WNEPTLEQAC PILN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.14e-63ARR-B family protein