PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41235.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ARR-B
Protein Properties Length: 614aa    MW: 67237.7 Da    PI: 7.0063
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.57.3e-24173226155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k++++Wt+ LH+rF++a++++   ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  GAY41235.1 173 KAKVVWTNSLHNRFLQAIRHI-TLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 226
                 6799*****************.9*******************************6 PP

2Myb_DNA-binding28.24.4e-09176225248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT  ++ ++++a++    +   +k+I + m+  g+t++++ s++qky+
       GAY41235.1 176 VVWTNSLHNRFLQAIRHITLEkaVPKKILEFMNvPGLTRENVASHLQKYR 225
                      68**************9999999**************************7 PP

3Response_reg78.72e-26161241109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakd 96 
                   vl+vdD+ + + ++  +l++ +y +v +++ + +al++++ ++ +Dl+++D+ mp+m+Glel kei+ee  +lp++v+++ + e+ + + l  Ga  
    GAY41235.1  16 VLVVDDDSTSLAIVSAVLKHWDY-DVVTVKRPVDALAMIRIHQdIDLVITDLHMPEMNGLELQKEINEEFIHLPVMVMSSDDRESVIMKSLASGAVF 111
                   89*********************.***************87777***************************************************** PP

                   EEESS--HHHHHH CS
  Response_reg  97 flsKpfdpeelvk 109
                   + +Kp++p++l++
    GAY41235.1 112 YMVKPVNPDALRN 124
                   **********987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MSETFMAKPS FLRFNVLVVD DDSTSLAIVS AVLKHWDYDV VTVKRPVDAL AMIRIHQDID  60
LVITDLHMPE MNGLELQKEI NEEFIHLPVM VMSSDDRESV IMKSLASGAV FYMVKPVNPD  120
ALRNVWQYAV TSKKGKSIFI EEKKKESKTN SKRKASKRRK DELEGENAAA PKKAKVVWTN  180
SLHNRFLQAI RHITLEKAVP KKILEFMNVP GLTRENVASH LQKYRIFLKR VAENGINAAL  240
KNFNHRSSLA SGRTSMMLQE VQDYAQAIEK QLQMRTSPFI PRYGRGISEL NGNTSFGSIG  300
LQSHNSLSHM GLLGVQDNFH QPFFGNTTYP LYQANPGTTF GTGLIDMGTN SFSCGGLSGG  360
LMNGTNSNQI FHQKSKLRPD PYDNNTGASS LKGFGASGLE KMWTINNNPY LNYAGIRLKN  420
DGDQLVGAGE VGLNVKGDAG AGNEGPTFHH LPLGYSSSPA GFAVGNEQEH TSVLPPLSLS  480
QQQYGLGKKV ENDFTFGLMN TVNASVNDDT AQPGRLGEGA DFGDLLFDLS DFQFLFQQQG  540
DGEGALNPNI GSGSGSHQPE LNRPINQSQN PVLPSAFADN ASGPWNEPTL EQIINAKILC  600
SDSGHSRSNE PGFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143160KKKESKTNSKRKASKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-50ARR-B family protein