PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41235.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 614aa MW: 67237.7 Da PI: 7.0063 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.5 | 7.3e-24 | 173 | 226 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH+rF++a++++ ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ GAY41235.1 173 KAKVVWTNSLHNRFLQAIRHI-TLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 226 6799*****************.9*******************************6 PP | |||||||
2 | Myb_DNA-binding | 28.2 | 4.4e-09 | 176 | 225 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ + +k+I + m+ g+t++++ s++qky+ GAY41235.1 176 VVWTNSLHNRFLQAIRHITLEkaVPKKILEFMNvPGLTRENVASHLQKYR 225 68**************9999999**************************7 PP | |||||||
3 | Response_reg | 78.7 | 2e-26 | 16 | 124 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakd 96 vl+vdD+ + + ++ +l++ +y +v +++ + +al++++ ++ +Dl+++D+ mp+m+Glel kei+ee +lp++v+++ + e+ + + l Ga GAY41235.1 16 VLVVDDDSTSLAIVSAVLKHWDY-DVVTVKRPVDALAMIRIHQdIDLVITDLHMPEMNGLELQKEINEEFIHLPVMVMSSDDRESVIMKSLASGAVF 111 89*********************.***************87777***************************************************** PP EEESS--HHHHHH CS Response_reg 97 flsKpfdpeelvk 109 + +Kp++p++l++ GAY41235.1 112 YMVKPVNPDALRN 124 **********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence |
MSETFMAKPS FLRFNVLVVD DDSTSLAIVS AVLKHWDYDV VTVKRPVDAL AMIRIHQDID 60 LVITDLHMPE MNGLELQKEI NEEFIHLPVM VMSSDDRESV IMKSLASGAV FYMVKPVNPD 120 ALRNVWQYAV TSKKGKSIFI EEKKKESKTN SKRKASKRRK DELEGENAAA PKKAKVVWTN 180 SLHNRFLQAI RHITLEKAVP KKILEFMNVP GLTRENVASH LQKYRIFLKR VAENGINAAL 240 KNFNHRSSLA SGRTSMMLQE VQDYAQAIEK QLQMRTSPFI PRYGRGISEL NGNTSFGSIG 300 LQSHNSLSHM GLLGVQDNFH QPFFGNTTYP LYQANPGTTF GTGLIDMGTN SFSCGGLSGG 360 LMNGTNSNQI FHQKSKLRPD PYDNNTGASS LKGFGASGLE KMWTINNNPY LNYAGIRLKN 420 DGDQLVGAGE VGLNVKGDAG AGNEGPTFHH LPLGYSSSPA GFAVGNEQEH TSVLPPLSLS 480 QQQYGLGKKV ENDFTFGLMN TVNASVNDDT AQPGRLGEGA DFGDLLFDLS DFQFLFQQQG 540 DGEGALNPNI GSGSGSHQPE LNRPINQSQN PVLPSAFADN ASGPWNEPTL EQIINAKILC 600 SDSGHSRSNE PGFG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 160 | KKKESKTNSKRKASKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-50 | ARR-B family protein |