PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 139aa MW: 16481.9 Da PI: 10.8637 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.7 | 7.1e-13 | 27 | 99 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++yfF++ +kk+ +g+r + +g+W+ k v+s+ +++++g kk + + k ++p + W+mhey+l GAY41028.1 27 GEDLYFFTRLKKKSVNGSRIDHRVGTGTWQGEDVGKVVVSRnSRKKIGFKKRFRYEKDKSPY--NGCWIMHEYSL 99 4678******************99******9999999988867788*********9666666..99*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MRTENLYGSK ELWQIWRQFG RLDLEYGEDL YFFTRLKKKS VNGSRIDHRV GTGTWQGEDV 60 GKVVVSRNSR KKIGFKKRFR YEKDKSPYNG CWIMHEYSLN PSLLPQNLRS SDLVLCRIRK 120 NGEPRQPGRK IQGKRESRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 4e-11 | NAC family protein |