PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41004.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 334aa    MW: 37126.9 Da    PI: 6.3577
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-1984132355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  GAY41004.1  84 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARKIRG 132
                 9*******.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MCGGSILGDF FLRHGGSRVT ASDLWPNSPF AATKQLPHNF ESTPFSDEHQ SLAKIKRPQP  60
PSSLNSSSAS GDEKKPKRQR KNLYRGIRQR PWGKWAAEIR DPRKGVRVWL GTFNTAEEAA  120
RAYDKEARKI RGKKAKVNFP NEEDVFTVTP AAAAHAYHHH QHNHNPTPSP LPSLSQEDLF  180
SRNNSSISSV GFDLYGYDLN PQIVTSGGDE NSGTGSGSVS EGGYDSTELM LNCNQNVNDG  240
SFAQMKVKAE EQEEEEKRKA EEEENEVRKL SEELMAYENF MKFYQLPYLD GQSPVSNNNN  300
NNNNINIVHE GVVGNLWSFD DVTVAPAPAN SKAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580KPKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-38ERF family protein