PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40600.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 298aa    MW: 32963.7 Da    PI: 5.2795
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19e-184088355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp +   + r++lg+f+tae+Aa a+++a+++++g
  GAY40600.1 40 FLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEDAALAYDRAARSMRG 88
                56******.**********843...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDFSNLRTNS SSVPSPTKTK RKQQKQQQQQ NHMRQDEIRF LGVRRRPWGR YAAEIRDPAT  60
KERHWLGTFD TAEDAALAYD RAARSMRGSK ARTNFVYSDM PAGSSVTSII SPDHYQPPQH  120
DDVVSSLFAV TAAAAADTNT NNNNINQLFN FSDQFSAETI RRSTTYKPIT SVMDAADQAD  180
DHQTYTNGDF CELPPLPPDA SSSSCYYYNY HDPAAAVAGL MGNSDLGFGA WNDQTTGFDY  240
SSSSSFSTTT TGVQYFMQEQ QQHHSGQIFG GMPSVSSDAV TDGFDFSSSS SSSSTYFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.19e-33ERF family protein