PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40468.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 387aa MW: 43505.7 Da PI: 9.7779

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.3	1.3e-31	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+++AtPk +l++m++kgL+++hvkSHLQ+YR GAY40468.1 92 PRLRWTPELHLCFVQAVERLGGQDRATPKLVLQFMNIKGLSISHVKSHLQMYRN 145 8****************************************************6 PP
2	Myb_DNA-binding	53.1	7.5e-17	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ GAY40468.1 93 RLRWTPELHLCFVQAVERLGGQdraTPKLVLQFMNiKGLSISHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MPTLIYNALL ETGEENYSQL YRKMKGSTDH STSDHSKKTN HSNKIGTSDP NIYCKSIKGE 60 SSSNSSIEET VNDQNKAASS GSTRQYNRSK TPRLRWTPEL HLCFVQAVER LGGQDRATPK 120 LVLQFMNIKG LSISHVKSHL QMYRNKKIDD PNQEPGLLLG GGGGGGGDHR ICNFSQLPMI 180 PHFNQRNFST LRFDDKASWR GQRDRSYGLN TGENAMFDRA KHGLYAAVAK RLLSSQDKKS 240 LKRDSIEQDT SKTYQTFEES EFFQRFKPSR PISSIEPNLK THVQENAKDE KKPVNDGSSC 300 GCNSWPLMDQ KFGSNKLKRK KNWDSECDDL DLNLSLKIKP NKIDDDGRDE VESSLCLSLS 360 SSSPSKLSRL KKKDKKAASA STLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MPTLIYNALL ETGEENYSQL YRKMKGSTDH STSDHSKKTN HSNKIGTSDP NIYCKSIKGE  60
SSSNSSIEET VNDQNKAASS GSTRQYNRSK TPRLRWTPEL HLCFVQAVER LGGQDRATPK  120
LVLQFMNIKG LSISHVKSHL QMYRNKKIDD PNQEPGLLLG GGGGGGGDHR ICNFSQLPMI  180
PHFNQRNFST LRFDDKASWR GQRDRSYGLN TGENAMFDRA KHGLYAAVAK RLLSSQDKKS  240
LKRDSIEQDT SKTYQTFEES EFFQRFKPSR PISSIEPNLK THVQENAKDE KKPVNDGSSC  300
GCNSWPLMDQ KFGSNKLKRK KNWDSECDDL DLNLSLKIKP NKIDDDGRDE VESSLCLSLS  360
SSSPSKLSRL KKKDKKAASA STLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	2e-44	G2-like family protein