PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40454.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 279aa MW: 30988.1 Da PI: 8.8126

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.7	1.1e-14	83	129	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L A+e++k+L GAY40454.1 83 KSHSQAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGSAIEHVKDL 129 68***********************8.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MENFSHQSAT ACPDQMNYWA ANSNFPLTWL QQTPAPHVNS SASTSNSNSN SIDHHFHELP 60 YSWSNINPMT QEVAEDRATA VSKSHSQAEK RRRDRINAQL ATLRKLIPKS EKMDKAALLG 120 SAIEHVKDLK LKAMEVSKTL TIPTEVDEVT VECELFQAAE ARAETEAGSS INKVKGDTLI 180 KASVSCDDQP ELYKEIIRVL KGLGLTTVRA DISSVGGRIK SILVLCNKDA CDHQESVSLS 240 RRLKQALHLA LSRMSSSSSM ASNCRIRSKR QRLFLPYHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	4e-45	bHLH family protein