PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40310.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 250aa    MW: 28693.7 Da    PI: 6.2462
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.16.5e-3168254129
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                 + +ewyfFs rd+kyatg r+nrat sgyWkatgkd++v++  ++elvg++ktLvfy++rap+g kt W+mhe+rle
  GAY40310.1   6 NASEWYFFSFRDRKYATGFRTNRATVSGYWKATGKDRTVIDPtTRELVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 82 
                 567*************************************9977888***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
EVAKLNASEW YFFSFRDRKY ATGFRTNRAT VSGYWKATGK DRTVIDPTTR ELVGMRKTLV  60
FYRNRAPNGI KTGWIMHEFR LETPHMPPKE DWVLCRVFHK SKGENSENLS PQFIYESAAN  120
NNASSFTPSA ASPPTADCRM INMPFGYHQQ QHISSSAPGS YRNHNNQSSN SMLNLLQFPT  180
SQDQKNNNKN QSNDIISSKS NYDDYGFIWE MEMDLQENCC SLENDDNNGG VASNLEDDMR  240
FELDNSMVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.15e-63NAC family protein