PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY40247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | G2-like | ||||||||
Protein Properties | Length: 477aa MW: 52646.4 Da PI: 5.6363 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.6 | 1.6e-34 | 258 | 312 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ GAY40247.1 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 312 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 57 | 4.5e-18 | 260 | 311 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ GAY40247.1 260 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 311 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MEARPLSIQR SSARQLNNLG VSGPMSSSLP VLPTPLEDTY SKLPNSQQVY MEQELRTRPL 60 APAPHIPANS GVVGHIFSSS SGLSSDLQYS SASPHEKLPR TTSFISQSST PIPQTSHSGL 120 PQSSTSSHYT KESSSSWCPE SLPGYVDFAA NTPVQNSQME GSSCSGAIVS EEFSKRNDWH 180 EWADQLITDD DPLGSSWNEI LADTSMTEME PKMSYQVPKT PTSMPAHRTQ VHQQLPASST 240 EIRTVVTPSA SANNAPAKPR MRWTPELHEA FVEAVNQLGG SERATPKGVL KLMKVEGLTI 300 YHVKSHLQKY RTARYRPDSS EGSSEKRLTP LEEISSLDLK TGIEITEALR LQMEVQKRLH 360 EQLEIQRNLQ LRIEEQGKYL QMMFEKQKSG IDMLKGSSSN QENSSTSLTK SELEGTQVDH 420 DKKGSDTANA NSTNEESSQP KELDGKQKAP ETEAPENAEL NVSELSSQPS KRPRTEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 1e-111 | G2-like family protein |