PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39895.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 441aa MW: 49049.3 Da PI: 8.3364

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl GAY39895.1 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.5e-21	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ GAY39895.1 48 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MYHHHQNQGK SMHSSSRMPI STERHLFLQG GSGPGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANI GNNKIGKKTI 120 SQKSANYQKD QNCNTYLACK AHTGIGGMKF KSSGVGPVTV PGERMPEANA THMNNLSIGP 180 QPNKSLHISE TIQMQIEVQR RLHEQLEVQR HLQLRIEAQG KYLQAVLEKA QETLGRQNLG 240 TAGLEAAKVQ LSELVSKVST QCLNSTFSDL KELQGFCPQQ PQANQPTDCS MDSCLTSCEG 300 SQKDQEIHNG GVRLRPYHGT PTLEPKEIVE EPMLQQTELK WRKDLKESKF LSSIGKDRGP 360 GELSIGSGSF PEGRFKASNE DEHFQDQTNK KPEGAKLENE NLLPEYRLPC FSTKLDLNAH 420 DHENDVASGC KQFDLNGFSW N

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MYHHHQNQGK SMHSSSRMPI STERHLFLQG GSGPGDSGLV LSTDAKPRLK WTPDLHERFI  60
EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANI GNNKIGKKTI  120
SQKSANYQKD QNCNTYLACK AHTGIGGMKF KSSGVGPVTV PGERMPEANA THMNNLSIGP  180
QPNKSLHISE TIQMQIEVQR RLHEQLEVQR HLQLRIEAQG KYLQAVLEKA QETLGRQNLG  240
TAGLEAAKVQ LSELVSKVST QCLNSTFSDL KELQGFCPQQ PQANQPTDCS MDSCLTSCEG  300
SQKDQEIHNG GVRLRPYHGT PTLEPKEIVE EPMLQQTELK WRKDLKESKF LSSIGKDRGP  360
GELSIGSGSF PEGRFKASNE DEHFQDQTNK KPEGAKLENE NLLPEYRLPC FSTKLDLNAH  420
DHENDVASGC KQFDLNGFSW N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-158	G2-like family protein