PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY39828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 175aa MW: 19701.1 Da PI: 9.1712 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.1 | 1.6e-19 | 52 | 137 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y++Y+k+ GF v++++skk +g tf C ++g+++++ ++ +r++++t+tgC+ak+ +++dgkw+v +l leHnH l+p GAY39828.1 52 YYKAYGKQKGFPVKRRTSKKG-SDGILRYVTFACGRSGTSRSNPSN---FSRSQTNTKTGCNAKVGGCLDEDGKWQVRTLILEHNHGLNP 137 8**************999887.899999*************99988...8999999******************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MKDLEKEGLV ILKDDGLEGN VDEFENVEDV EKRVDEPAFG ISFDSADEMF TYYKAYGKQK 60 GFPVKRRTSK KGSDGILRYV TFACGRSGTS RSNPSNFSRS QTNTKTGCNA KVGGCLDEDG 120 KWQVRTLILE HNHGLNPGKS MYFRCNRNSS SHVKRQLETN DRAGKKLLNM MMSHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 6e-14 | FAR1 family protein |