PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39599.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 314aa    MW: 34772.1 Da    PI: 7.5782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84e-13189234655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L++l+P+     +k  + a++Le+AveY+k Lq
  GAY39599.1 189 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLEEAVEYVKFLQ 234
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MQPTAGGSSS SSGGGGGGVG GRGELSRGGL ARLRSAPASW IDALLEEELE DPLKPNQCLT  60
QLLSSGNPVS VTAGLSLSQS QLDQVGFQRQ NSSPADLFDG YFSNYATPSS YDYVDVSPNS  120
NKRAREDNNA QFPSPTAKLN FHSHLKVEQS GQVPGGVSNL VDMDMEKLLE DSVPCRVRAK  180
RGCATHPRSI AERVRRTRIS DRIRKLQDLV PNMDKQTNTA DMLEEAVEYV KFLQKQIEVL  240
HFLENSPFGV SETGTHRASE EMQMLGKRLI LEVTKFVTIY TRLKSIMVCL AIISYDSYPP  300
RDQPRNNRWH NLYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-59bHLH family protein