PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39571.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 359aa MW: 38802 Da PI: 9.7279

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.5e-31	287	344	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYeg+Hnh GAY39571.1 287 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPMMLIVTYEGDHNHA 344 99**********************988**************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAVELMMGYG CGDSFAAAVK MEENAVQEAA SEGMQSIGEF IKLLSRSGQV PSEQKTQYQE 60 STSPSPTNLE PDKEIKVAAE VAVNNFKKVI SLLGRPRTGH ARFRRAPVGS PPPPPPPPPQ 120 KEEKVHLQEP AGPSVQSTNH LSKEQVSAFK VYCPTPVHRL PPLPHHVQKS NPNSTVVTKS 180 DHVPSSINFS ASATNSFISS LTGTAGDTDS IQPSFSSGFQ FTTPSSAGKP PLSSSSLKRK 240 CNSMDDAALK CGSSSGRCHC SKKRKSRIKR VTRVPAISSK MADIPPDDYS WRKYGQKPIK 300 GSPHPRGYYK CSSVRGCPAR KHVERALDDP MMLIVTYEGD HNHAFAVHDA PAAMVLESS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAVELMMGYG CGDSFAAAVK MEENAVQEAA SEGMQSIGEF IKLLSRSGQV PSEQKTQYQE  60
STSPSPTNLE PDKEIKVAAE VAVNNFKKVI SLLGRPRTGH ARFRRAPVGS PPPPPPPPPQ  120
KEEKVHLQEP AGPSVQSTNH LSKEQVSAFK VYCPTPVHRL PPLPHHVQKS NPNSTVVTKS  180
DHVPSSINFS ASATNSFISS LTGTAGDTDS IQPSFSSGFQ FTTPSSAGKP PLSSSSLKRK  240
CNSMDDAALK CGSSSGRCHC SKKRKSRIKR VTRVPAISSK MADIPPDDYS WRKYGQKPIK  300
GSPHPRGYYK CSSVRGCPAR KHVERALDDP MMLIVTYEGD HNHAFAVHDA PAAMVLESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	1e-93	WRKY family protein