PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39552.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 317aa    MW: 35438.3 Da    PI: 6.87
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.84.6e-14103151355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  GAY39552.1 103 EMHILTERERRKKMRNMFSNLHALLPHL----PPKADKSTIVDEAVKYIKTLQ 151
                 57999**********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MAWFLVIFLN DNGHCHIIMA CAAQNNLRVN SSFDVSGVSS GSEEKIIRLE TMKQPDNSRT  60
HSPTTAEMET TPAEAEEQAR AQVGKKRSRN IGKAVSGGES EHEMHILTER ERRKKMRNMF  120
SNLHALLPHL PPKADKSTIV DEAVKYIKTL QHTHQTLEKQ KFEKVQGATT VDHEQSIITS  180
PLEAVIESRE AYLADHLGSS VPKNLSMAAN IHHSLQVPSD CFQTWFSPNV VVNMCGDDAQ  240
ISVCSPRKPG LLTTIFYILE KHNLDVVSAH VSSDRYRSMY MIHAHAGGAS YQFPESISVE  300
EMFKLAVGEM NLWLLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-40bHLH family protein