PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39542.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 272aa    MW: 29935.8 Da    PI: 9.2633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08180220954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  GAY39542.1 180 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 220
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFDRLKSAA TEDQMEMMVM MMQMDKFPEF YGACTNNDVA ELLPADHTSA TITTNNNIAS  60
STPHFVDNNN PHIVSSPSFS NMLSNSNTSL NGTSITAAQG TSIPTYLSYS PNERYWRGGA  120
GDSNSSTGVP LSQKQNSMAA MRETIFRIAA MQPIHIDPDS VKPPKRRNVK ISKDPQSVAA  180
RHRRERISER IRILQRLVPG GTKMDTASML DEAIHYVKFL KTQVQSLERA AANRPAGIGF  240
PATLTTGNYP PIIGKEYQQP AVRNGALHYG DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-41bHLH family protein