PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39273.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 312aa    MW: 34584.9 Da    PI: 8.249
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-18111161256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r r++lg++++ae Aa a+++a+ kl+ge
  GAY39273.1 111 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSAEAAAYAYDRAAYKLRGE 161
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEGFQENNQP FAFNDGADIR SSLSQLILTG GTNTIDSIFS RCTPTSTMSS PAFEPLGSSV  60
YLRQRDLLQK FSEENKTTNT TLARNYLTNI PLQNCAYTSS STYIAPPKKK LYRGVRQRHW  120
GKWVAEIRLP QNRMRVWLGT YDSAEAAAYA YDRAAYKLRG EYARLNFPNL KDPSKLGFGD  180
CSKLNALKSA VDAKIQAICQ KVKRERAKKS AKRSCILSDG GSKVASETES EKVEKVVDSC  240
SSSSTMSPLI FGDGDLVSPT VSEDGFWKGE NSQPSVSTEH LMTTTVESDF EGCSLARLPS  300
YDPELIWEVL AN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-61ERF family protein