PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39238.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 332aa    MW: 36947.4 Da    PI: 6.6834
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-19119169155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  GAY39238.1 119 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 169
                 59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MVNSRHSVIP PVKYTEHRKH TKLMTPFSTN GQEMKPRVVR ISVTDGDATD SSSDEDCEVY  60
KRPRVKKFLS EIMIASSPSS SEIDVVSKSR ISKCKKKKKS GKVGAPVTLK PAAKQPAGKK  120
FRGVRQRPWG KWAAEIRDPL RRVRLWLGTY DTAEEAAMVY DNAAIQLRGP DALTNFATPP  180
PKFPSQIKQS LSSGYNSGEE SHNNINNLSS PVSVLRCPSP SNEEAESRTS KESPDIASDM  240
REMRDESSAS ETLSAFSEYS TFDNTLFPND IFDFKSSVPD LFGCAEGIFK DDWDGLFYDS  300
SMDFGFGLST WRADDHFQDI GDIFASDNLV AI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-64ERF family protein