PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY39190.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 315aa MW: 35131.3 Da PI: 5.9937 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.6 | 6.9e-30 | 139 | 195 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+vers+ dp v++itY eHnh GAY39190.1 139 DKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVERSSADPGVFIITYGAEHNH 195 99************************998**************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
PILTRDFVCM DWDLQAIVRG CSTEASIDSV MDKPQSYNFS PSSLQQDVRF KFPDVSETTT 60 ILDELEELYK PFYPQTILTS TSISAPTEVN KKPKKLRKQR PKLSDSASNT DHPAAQPKGG 120 KNQHKRVVQR VTADCLACDK WAWRKYGQKP IKGSPYPRSY YRCSSSKGCL ARKQVERSSA 180 DPGVFIITYG AEHNHGHPTR RSALAGSTRS KLASMSKAQG PAQKEPFEPA SEASAELGDL 240 VYQGNIKKED ENAFKDGQEN ELVMPDLTFG DELMFPSLED LEGFLLDQFP DHNINISADD 300 NSWFIDESVT LNGGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 7e-38 | WRKY family protein |