PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38963.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 341aa    MW: 38734.6 Da    PI: 8.8045
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.71.2e-32391653128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 +GfrF+P++e+++ + L+kk  + ++   ++ik++ di+++ePwdL   +k+++e++ +yfF+k   ky++++r++r t++gyWk tg+  ++++ ++ 
  GAY38963.1  39 MGFRFQPSNEQII-CLLEKKRLNPRFLH-HTIKDIdDICSLEPWDLAgaSKTESEDRVCYFFCKPCYKYKKSTRAHRRTNAGYWKVTGRGSKIKT-RNG 134
                 7************.77888888877655.67***999*********8533777788899***********************************9.888 PP

         NAM  99 lvglkktLvf.ykgrapkgektdWvmheyrl 128
                 l g+kk+L+f y+g a+k  k  Wvmhey++
  GAY38963.1 135 LSGTKKILTFqYHGPASKKAKIGWVMHEYHV 165
                 9*********569999999**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MESHGGFRSL PTIEEVVTTL ILLCAALYSQ LKSEMESLMG FRFQPSNEQI ICLLEKKRLN  60
PRFLHHTIKD IDDICSLEPW DLAGASKTES EDRVCYFFCK PCYKYKKSTR AHRRTNAGYW  120
KVTGRGSKIK TRNGLSGTKK ILTFQYHGPA SKKAKIGWVM HEYHVNDDPS YKKEFVLCRI  180
ERKCDNKHGI STSDGGESRQ QLVSPIQLSP RDPRNLSEEN TPTNSQQQLP NHNLISCPGN  240
HIEQNTPTFP RVIPNANLIS PTDLLSSDHL NSNRNHSEGN ILTNQQQQPN HNLISPFGNL  300
IEENSPTNPQ QPPDSNSNSF PRNLIGQYTL KYPQKNSYCV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-23NAC family protein