PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 219aa MW: 24907.2 Da PI: 9.1589 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.6 | 2.2e-31 | 40 | 94 | 2 | 57 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 + vrYkeClkNhAa++Gg a+DGCgEfmps geeg++++lkC+AC+CHRnFHR+e GAY38685.1 40 KVVRYKECLKNHAAAIGGSATDGCGEFMPS-GEEGSIESLKCSACNCHRNFHRKEI 94 679**************************9.999********************96 PP | |||||||
2 | Homeobox | 15.2 | 3.8e-05 | 152 | 207 | 1 | 52 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrR 52 +r Rt+ft+eq e + ++ e + ++++++ ++ +++g++ r+ kvW +N + GAY38685.1 152 KRFRTKFTQEQKEKMLRFAEradwRIQKLDESVVQQFCQEIGIKRRVLKVWMHNNK 207 789************98777777678****************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MNSSSSPPKE RQFIVLVNSS NSNGNIVVQD HEEQKNPCKK VVRYKECLKN HAAAIGGSAT 60 DGCGEFMPSG EEGSIESLKC SACNCHRNFH RKEIGCDAHY HHLHQQAMMM LSGKSGSAHS 120 ASDEKDEGRG VVVGRPAPAD DDDHQKRMMM RKRFRTKFTQ EQKEKMLRFA ERADWRIQKL 180 DESVVQQFCQ EIGIKRRVLK VWMHNNKHSF AKKNSSSFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 1e-58 | ZF-HD family protein |