PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38455.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 333aa MW: 36329.5 Da PI: 8.2659

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4e-25	89	133	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ GAY38455.1 89 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEA 133 79****************************************996 PP
2	QLQ	59.1	1.3e-20	21	56	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Qlq+L++Q+l++Ky+++++P+PpeL+ ++ GAY38455.1 21 SPFTPTQLQELEHQALIFKYMVSGVPIPPELIYSVK 56 89*****************************87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MMTDGGATTS CGARDHSIIR SPFTPTQLQE LEHQALIFKY MVSGVPIPPE LIYSVKRSLD 60 SSLVSSLFPP QAPHVGWGCF QVGFGRKADP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM 120 HRGRNRSRKP VEAQALTSSS VPNISSSSTA SNPNPNPSPS LNKKLSINTP ISSVSSSYPF 180 SPSSSISPEL YAYQDPSQKS CTHINPFLCP HSSSSSRPPG SSSFSIHDNV TTRHLFLDSG 240 SCSQTDKDYS SYNFHGIREG AVDERAFFPE ASGSIRSFQD SCPGPLVTID ESTQIADQVS 300 IMDNYTVSKR VPAGGHSLIV EVVDGKGLNL RCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-64	GRF family protein