PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38048.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 319aa    MW: 35221.6 Da    PI: 6.7733
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.24.9e-30156209155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  GAY38048.1 156 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 209
                 59*******************.********************************8 PP
2Myb_DNA-binding48.42.2e-15158208148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
       GAY38048.1 158 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 208
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGEEVRMTEY EVNDKGDYNG DDERIPEWEM GLPNGTDLTP LSQSLIPPEL ASAFSILPVP  60
CRTHLDVNRA SQTTLSSIRG SRAHSLSSTD NNNSNNLKTL TENRDPMVTE TEEQDQNGSF  120
ADSRSKSRRP DCTEEADSAL RTDNSNEDPS ARTLKRPRLV WTPQLHKRFV DVVAHLGIKN  180
AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGLSND DPSSLNCLSL SNLFRTFGSG  240
GLGCGSAKLA ASSVLVDLFY YLPDCGASSA GFQQQITSCN MSSQQLVRIS VSALMPTYGM  300
LIRHLVRPSG KKSQMCAQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-72G2-like family protein