PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37689.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 690aa MW: 74527.2 Da PI: 5.9244

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.2	3e-32	271	328	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers +++++ei+Y+g Hnh+k GAY37689.1 271 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-EGHITEIIYKGAHNHPK 328 7**************************************.*************85 PP
2	WRKY	103.8	9.4e-33	483	541	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ GAY37689.1 483 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 541 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG 60 NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI 120 PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN 180 TSFAFKPVAE SAKFHSQYRN SLSLQVQTDF SRATTEKDNG CNTILADQRV FDTFGGSTEH 240 SPPLDEQQDE EGDQRGSGDS MVAGAGGASS EDGYNWRKYG QKQVKGSEYP RSYYKCTHPN 300 CQVKKKVERS LEGHITEIIY KGAHNHPKPP PNRRSAIGSN PLDMQLDIHE QAGLQSGADG 360 DPSWANTQKG TAGGTPEWRH DTVEVTSAAP VGPEYCNQSS ALPAQNGTPY ESGDAVDASS 420 TFSNDEDEDD QATHCSVGFD GEEDESESKR RKIEAYATEM SGATRAIREP RVVVQTTSEV 480 DILDDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCTVRKHV ERASHDLKSV ITTYEGKHNH 540 DVPAARNSSH VNSGSSSAVA AHAAAAGQIH RPEPSQLHNS MARFDRPASF GSFRVPGRQQ 600 FGPSPGFSFG MHQPGLANLS MAGLGPGQPE LPVLPVHPYL AQQRQVNEMG FMMPKGEPKV 660 EPMSEPGLNL SNRSAVYQQL MSRLPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG  60
NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI  120
PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN  180
TSFAFKPVAE SAKFHSQYRN SLSLQVQTDF SRATTEKDNG CNTILADQRV FDTFGGSTEH  240
SPPLDEQQDE EGDQRGSGDS MVAGAGGASS EDGYNWRKYG QKQVKGSEYP RSYYKCTHPN  300
CQVKKKVERS LEGHITEIIY KGAHNHPKPP PNRRSAIGSN PLDMQLDIHE QAGLQSGADG  360
DPSWANTQKG TAGGTPEWRH DTVEVTSAAP VGPEYCNQSS ALPAQNGTPY ESGDAVDASS  420
TFSNDEDEDD QATHCSVGFD GEEDESESKR RKIEAYATEM SGATRAIREP RVVVQTTSEV  480
DILDDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCTVRKHV ERASHDLKSV ITTYEGKHNH  540
DVPAARNSSH VNSGSSSAVA AHAAAAGQIH RPEPSQLHNS MARFDRPASF GSFRVPGRQQ  600
FGPSPGFSFG MHQPGLANLS MAGLGPGQPE LPVLPVHPYL AQQRQVNEMG FMMPKGEPKV  660
EPMSEPGLNL SNRSAVYQQL MSRLPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein