PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY37623.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15609.3 Da PI: 8.4483 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.5e-18 | 14 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+WvAe+r p++ r r++lg++ ta+eAa+a++aa +l+g GAY37623.1 14 RYKGVRMRK-WGKWVAEVRQPNS---RGRIWLGSYKTADEAARAYDAAVVCLRG 63 69*****99.*******999843...48***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MVRPSGGREG NNGRYKGVRM RKWGKWVAEV RQPNSRGRIW LGSYKTADEA ARAYDAAVVC 60 LRGSSATLNF PDNPPEIPLA DEMTPVQIQE FAFRHARRAP AQSVEDLGSN EAAVVSASGS 120 SSGYGVDDVG VDGAFYQSPG LWTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-27 | ERF family protein |