PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY37622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 22082.5 Da PI: 4.5644 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 4.9e-18 | 15 | 65 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGVr +k +g++v+eIr p++ r+r++lg+++tae+Aa+a +aa +l+g GAY37622.1 15 SRYKGVRKRK-WGKYVSEIRLPNS---RARIWLGSYDTAEKAARAFDAALFCLRG 65 79*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MVKHVVEKPA ERSDSRYKGV RKRKWGKYVS EIRLPNSRAR IWLGSYDTAE KAARAFDAAL 60 FCLRGRSAKF NFPDNPPDIS GGRSLKPSEI QAVAAQFANS EPLRSQSPEQ SVSELQTEYL 120 SPSISEATVQ LDSDGVFDGS LLDLLTASSS SNYPSEYGIF PGFDDLSNDI FAPQLPAVDF 180 ADENFDGLLL NQDSFLWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 24 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 3e-55 | ERF family protein |