PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37574.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 519aa MW: 56267.9 Da PI: 4.61

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	299	344	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P++ K +Ka++L + ++Y+k Lq GAY37574.1 299 HSIAERLRREKIAERMKNLQELVPNS-----NKTDKASMLDEIIDYVKFLQ 344 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MDEYLDHYFS SSSWSDVNAK ERSSWDYSEP LQQNQLLPNS IGVYEDDEKN SPVGIAMEGL 60 AAQDTSSFVL GEESEYGIDK NLLSEETQYE KDGQNCNGNL SSMNRSLKLG NVGLQYDPAI 120 PTLGSMNLGS PKQLPLIGEM TTSPSFVDSE HVGGNSSELS DIQRSLRDLQ TISPSPELWL 180 PTSYEEVSSL SSVIEQPRTR GFYLQGATMN HDVDTTGNRY VGMDKILQFD CLSASIAAKG 240 EQELPNHPLS CFSSRPLPTV PTVGLPSLQQ TASANPTGGC NGTGKARVRA RRGQATDPHS 300 IAERLRREKI AERMKNLQEL VPNSNKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGAAGA 360 VLPLITDGQA EASKGLSLSP QADQGVDISL NSDQIAFEEE VVKLMESNVT KAMQYLQNKG 420 LCLMPIALAT AISSGKASSS DTISEENKFC FSNGLVQSNS SSASSNSSLP NNGINQMPLN 480 TNIIIGKPIG ESMMVNGCNR AVKEERNSQC TARELKPKT

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MDEYLDHYFS SSSWSDVNAK ERSSWDYSEP LQQNQLLPNS IGVYEDDEKN SPVGIAMEGL  60
AAQDTSSFVL GEESEYGIDK NLLSEETQYE KDGQNCNGNL SSMNRSLKLG NVGLQYDPAI  120
PTLGSMNLGS PKQLPLIGEM TTSPSFVDSE HVGGNSSELS DIQRSLRDLQ TISPSPELWL  180
PTSYEEVSSL SSVIEQPRTR GFYLQGATMN HDVDTTGNRY VGMDKILQFD CLSASIAAKG  240
EQELPNHPLS CFSSRPLPTV PTVGLPSLQQ TASANPTGGC NGTGKARVRA RRGQATDPHS  300
IAERLRREKI AERMKNLQEL VPNSNKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGAAGA  360
VLPLITDGQA EASKGLSLSP QADQGVDISL NSDQIAFEEE VVKLMESNVT KAMQYLQNKG  420
LCLMPIALAT AISSGKASSS DTISEENKFC FSNGLVQSNS SSASSNSSLP NNGINQMPLN  480
TNIIIGKPIG ESMMVNGCNR AVKEERNSQC TARELKPKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	294	ARVRARRGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	1e-59	bHLH family protein