PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37067.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 615aa MW: 68800.6 Da PI: 10.5784

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	8e-10	11	60	1	43
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksr 43 ++ W t+E++ l++avk++G ++W++++ +++ + t+ ck + GAY37067.1 11 KKTWGTWEELVLACAVKRHGFKNWDSVSVELQtktslphLLTTPQCCKQK 60 678*****************************655555544455555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MAMSSDGEQR KKTWGTWEEL VLACAVKRHG FKNWDSVSVE LQTKTSLPHL LTTPQCCKQK 60 YRDLERRFND DPQPHNNNNH NVLVPWLEHL RKVRVDELKR ELQRCDLSIL SLQLQVKKLE 120 EEREKPDLEI EKTRSLNDND KTDDPQKSER RPVKEVFNNR FLVSPAEEES NRSVNESNST 180 GFNPKHLLPK SEPEPAGGQS PVLSRSKGEL GDSVTPLSSD VQSSASFGIG TERKRGSAAA 240 GGHIIEGTYA ESEPLIRLLD LIRTHNHHLS SLFERRLKSQ VQESNEYKEL VRQHVDLETI 300 QTRVERGSYS ACILTFYRDL LLLFNNAIVY FPKASLESEA AHQLRNLVSN EIKKETHKSD 360 SSQEEAPPLP TPPPQTKPLL ERSDSLLAKQ KASAPIIVCR KRSSVSAKPS SSFAQKGDNQ 420 KQPSDGAKKP ATDVKQPSPV EQSLLKVKTE EKPITTGARS SRRSSRNLTS KTPPAPSTGN 480 KKQKTAAQGS KGGSGSVNKR ETPKTDNKKK AETSDKKKSV VDFLKRIKKN SPVHTVKRSK 540 GGEEQKKTNN SSGKKERILL RSSDKKQAKE ESSSPSKKSV GRPPRKMPEA SGKRGRDTGG 600 KEAVLAKRQS KRTKR

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MAMSSDGEQR KKTWGTWEEL VLACAVKRHG FKNWDSVSVE LQTKTSLPHL LTTPQCCKQK  60
YRDLERRFND DPQPHNNNNH NVLVPWLEHL RKVRVDELKR ELQRCDLSIL SLQLQVKKLE  120
EEREKPDLEI EKTRSLNDND KTDDPQKSER RPVKEVFNNR FLVSPAEEES NRSVNESNST  180
GFNPKHLLPK SEPEPAGGQS PVLSRSKGEL GDSVTPLSSD VQSSASFGIG TERKRGSAAA  240
GGHIIEGTYA ESEPLIRLLD LIRTHNHHLS SLFERRLKSQ VQESNEYKEL VRQHVDLETI  300
QTRVERGSYS ACILTFYRDL LLLFNNAIVY FPKASLESEA AHQLRNLVSN EIKKETHKSD  360
SSQEEAPPLP TPPPQTKPLL ERSDSLLAKQ KASAPIIVCR KRSSVSAKPS SSFAQKGDNQ  420
KQPSDGAKKP ATDVKQPSPV EQSLLKVKTE EKPITTGARS SRRSSRNLTS KTPPAPSTGN  480
KKQKTAAQGS KGGSGSVNKR ETPKTDNKKK AETSDKKKSV VDFLKRIKKN SPVHTVKRSK  540
GGEEQKKTNN SSGKKERILL RSSDKKQAKE ESSSPSKKSV GRPPRKMPEA SGKRGRDTGG  600
KEAVLAKRQS KRTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	9e-91	MYB_related family protein