PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37062.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 339aa    MW: 39083 Da    PI: 8.1607
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.44.9e-31175229155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rWt+ LH+rFve+ve LGG+ekAtPk il+lm+++gLt+ hvkSHLQkYR+
  GAY37062.1 175 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRT 229
                 68****************************************************8 PP
2Myb_DNA-binding41.82.5e-13179228348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT+ ++ ++v++v+ lGg    t+k I + m   g+t  ++ks++qky+
       GAY37062.1 179 RWTQHLHNRFVECVEFLGGAekaTPKGILKLMDiDGLTIFHVKSHLQKYR 228
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MKTEKRKVLE QRYSYRSSQE QLPCKVGLSF HSQLPNVEGE GSFKLNPGSC NASGFICSSN  60
FAMPNSVFYA AENCMDFSQD LDNFDLQSSV KVHLQYNQNP SLPKKQPHQD AYRNSPASVF  120
SFMQDPAEEE ASLNERQKCV SFSEYQKHQI LKPSSYHVQT HHEKQAPNTM TSHSKTRIRW  180
TQHLHNRFVE CVEFLGGAEK ATPKGILKLM DIDGLTIFHV KSHLQKYRTA RHIPEGKSKR  240
ERTTDLNAIV RLDSETFINR GMQLVETLKL QLDVQKRLHD QLEVQRNLQL QIEEQGKQLT  300
QMLDQQLKPN KSLVDSNNVD IELQDNQPND LKDARPFNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.17e-54G2-like family protein