PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36923.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ARF
Protein Properties Length: 820aa    MW: 92232.6 Da    PI: 5.1972
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.54.3e-17198298198
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+l  sd +k++ +v+  k ae+        ++kk+ +  ++ +d +g  W++++ +++ks+r++lt+GWk Fv++++L  gD+v+F +  +++ +l
  GAY36923.1 198 FYKKLRASDQSKKK-IVIRAKDAENVfpflahlDYKKQINYSVIAKDVHGVAWKFNF-VEGKSRRHYLTGGWKYFVRQKNLVPGDTVIFIR--DENNKL 292
                 77999899999887.********777*******99999*******************.799999**************************4..466767 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                 ++++ r
  GAY36923.1 293 RLGIKR 298
                 877765 PP
2Auxin_resp102.93.9e-34324405182
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                 +a+a+s+ks+F+v+Y+Pra +seFv+ ++k++k+++++v++G +++m++e++dss +r+sG+v+g  dldp rWpnSkWr+L
  GAY36923.1 324 VADAISNKSTFDVFYSPRARHSEFVICYQKYMKSIRKPVCIGEKIQMQYEMDDSSGKRCSGVVIGACDLDPNRWPNSKWRCL 405
                 6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 820 aa     Download sequence    
METIDAPSET ETDDLNSTEI SDEDDCEGEI ETDDLIFTEI SDKDDGAISQ FILDCFNHIH  60
SCSNLKYHHM LMLCYVRACP SSDYNLLLWQ AFAGPPPSLP KKGDLVVYFP QGHLEYSAPA  120
SVSKAPPTFY LKPEIICRVA DVRYLVSKKT DKVYTKMTLL PLPEMVGENF KGKEIQDLVV  180
DNKRDGEGST ANSTPPLFYK KLRASDQSKK KIVIRAKDAE NVFPFLAHLD YKKQINYSVI  240
AKDVHGVAWK FNFVEGKSRR HYLTGGWKYF VRQKNLVPGD TVIFIRDENN KLRLGIKRSI  300
QAVNDVPGSI IQKHNTYLDV LSPVADAISN KSTFDVFYSP RARHSEFVIC YQKYMKSIRK  360
PVCIGEKIQM QYEMDDSSGK RCSGVVIGAC DLDPNRWPNS KWRCLLVRWE EYIGTNCEEM  420
VSPWEIDCSL SLPSMLHSSP RLKRPRTSLQ DNLPAYSTTG LEFPESSITS EGEGTASLIN  480
AIDLNRPFDL EPQAPVPKNF LALALFPDED KILGIRTGET LESLEIDNLS SLASFLRSEL  540
AATTVKQLKI NKCPDLEVLL HRMAYTSLEY LEFSSCLFFS NSKRDYFPTT LKRLKICDCT  600
NAELILKVLM DQKGLALESL EVDGCSSLFS LPINQLPATL RHLRIVNCMN LKSLGESSKI  660
RNCDSVVGPE GESSLENMTS SHTLELRELE IWDCLELEFL PEDMRNFTDL NLLSISNCPS  720
LESFPEGGLP NTSLTSLLIS ECENLMSLPH QIHKATSLQD LSVSGCPSLM SFPHGGLPPN  780
LISLGIIDCE NLIPLSQWEL HKLKHLNKYT ILGGLPVLEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.11e-115ARF family protein