PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36804.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 428aa MW: 47399.8 Da PI: 5.0495

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.6	1.6e-05	14	46	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++++ + l+C+ ++ lC C + H+ GAY36804.1 14 SVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHS 46 568**************************9995 PP
2	zf-B_box	28.7	2.7e-09	57	102	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+++ ++++++ C +++ lC++C H + H++vp+ GAY36804.1 57 SQICDNCRSEPVTFRCATDNLVLCQECDWDAHGScsvsaaHDRVPI 102 579*************************9955999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MDMVSPQSDR NKESVPCDFC SDQIAVLYCR ADSAKLCLFC DHHVHSANLL SKKHIRSQIC 60 DNCRSEPVTF RCATDNLVLC QECDWDAHGS CSVSAAHDRV PIEGFSGCPS ALELASMWNF 120 DLQGKKLNET ASFGEYWNGS QDFESLWMYK ANGIMNSQDL TVPNEKGLFF NGDLMSCMSK 180 RQGQSQSPSC GKLKQVIHKQ LVELLKTNSM VNENGNKIIN NNDSNNDNNI SMNNRVGGRG 240 ENLVPTTRMN ELGNGVEQQA PFTSLLMMQR QFGSKECDRV GDEGMFWDGH SCGQGAQIWD 300 FNLGRLRGNE EFKQVEVAYG ASDSVFMIKN FNELMKETSL TNTEIFGEMY PMNCPVTHDD 360 MASFNNNSNN PTANQGSATS ESNNPPIARP SSGSAFGKPK GSSSSKNIQF EQHKQNINEI 420 ETPCGQGV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MDMVSPQSDR NKESVPCDFC SDQIAVLYCR ADSAKLCLFC DHHVHSANLL SKKHIRSQIC  60
DNCRSEPVTF RCATDNLVLC QECDWDAHGS CSVSAAHDRV PIEGFSGCPS ALELASMWNF  120
DLQGKKLNET ASFGEYWNGS QDFESLWMYK ANGIMNSQDL TVPNEKGLFF NGDLMSCMSK  180
RQGQSQSPSC GKLKQVIHKQ LVELLKTNSM VNENGNKIIN NNDSNNDNNI SMNNRVGGRG  240
ENLVPTTRMN ELGNGVEQQA PFTSLLMMQR QFGSKECDRV GDEGMFWDGH SCGQGAQIWD  300
FNLGRLRGNE EFKQVEVAYG ASDSVFMIKN FNELMKETSL TNTEIFGEMY PMNCPVTHDD  360
MASFNNNSNN PTANQGSATS ESNNPPIARP SSGSAFGKPK GSSSSKNIQF EQHKQNINEI  420
ETPCGQGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	5e-78	CO-like family protein