PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36782.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 291aa MW: 32047.3 Da PI: 6.6497

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.6e-33	143	200	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ GAY36782.1 143 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHH 200 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDDSSKEKSD RGQSSWKLGE PPDAGCVSYI LSEFGWNLQE HESSTSYFAA DHERSDLAGN 60 ISSSFPAETT TDGGGLTNPG RSADVSTSNP SVSSSSSEDP TEKSTGSGGK PPEIPSKARK 120 KGQKRIRQPR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP FPRSYYRCTN SKCTVKKRVE 180 RSSEDPTIVI TTYEGQHCHH TVGFPRGGLI NHEAAAFASH LTHAIPPYYY HQGVQITQET 240 PGIKQQSHEE ELIPVEAREH EPNALPEPPA LPPPTDEGLL GDIVPPGMRN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	4e-67	WRKY family protein